Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

[1.0.0] - 2022-08-01

Added

  • Initial release of basic feature set, including the following

  • Read filtering and trimming

  • Read alignment, deduplication, and BQSR

  • Variant calling and filtering

  • Joint-genotyping

  • Sex discordance and relatedness assessment

  • Generate MultiQC reports

  • Multiple run modes for initial QC, full end-to-end runs, and joint-calling only

  • Read the Docs documentation

  • Companion test data repo